Free Speculative Fiction Online 
(F & SF, March 2011)
. Alternate link.
Isfdb: 
(The Future Is Japanese Anthology, 2012).
(Panverse Anthology #3, 2011)
(GigaNotoSaurus, February 2012) Isfdb:
(Lightspeed, August 2012) Isfdb:
(Lightspeed, August 2013) Isfdb:
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(Empire of Dreams and Miracles Anthology, 2002)
(Writers of the Future Anthology #XIX, 2003).
(Polyphony #4, 2004). Alternate link.
(Strange Horizons, July 2004).
(On the Premises, July 2007).
(Thoughcrime Experiments Anthology, 2009). Available as part of this anthology.
(The Best New Science Fiction Anthology, 2011)
(Digital SF #1, 2011)
(Clarkesworld #52, January 2011) Isfdb:
Shelly Li: Saving Face (Crossed Genres #26, January 2011)
(Lightspeed, February 2011) Isfdb:
Shelly Li: To the Stars (Nature #470, February 2011)
.
(Clarkesworld #64, October 2011).
(Fireside Magazine #1, Spring 2012).
(Strange Horizons, _10_x 2012). Isfdb:
(Nine #1, 2012)
(F & SF, January 2012) Isfdb:
(Lightspeed, January 2012) Isfdb:
(Buzzy Mag, March 2012)
(Nature #484, April 2012)
(Daily SF, May 2012)
(Nature #486, June 2012)
(Apex Magazine #38, July 2012) Isfdb:
. Isfdb:
(Analog, December 2012) Isfdb:
(Lightspeed, December 2012). Isfdb:
(Unidentified Funny Objects Anthology #2, 2013).
Shelly Li: The Clean War (Buzzy Mag, March 2013)
(Apex Magazine #47, April 2013) Isfdb:
(Nature #497, May 2013).
. Isfdb:
(GigaNotoSaurus, August 2013).
.
(Fireside Magazine #5, September 2013)
(Lightspeed, October 2013) Isfdb:
(Apex Magazine, December 2013)
(Beast Within Anthology #4, 2014)
(Dead Man's Hand Anthology, 2014)
(Kaleidoscope Anthology, 2014)
(Tor.com, January 2014) Isfdb:
(Nature #505, January 2014)
(Clarkesworld #88, January 2014). Isfdb:
(Lightspeed, February 2014) Isfdb:
(Uncanny Magazine #1, November 2014)
(Clarkesworld #98, November 2014) Isfdb:
(Clarkesworld #102, March 2015) Isfdb:
(Genius Loci Anthology, 2016)
(Bridging Infinity Anthology, 2016)
(The Paper Menagerie and Other Stories Collection, 2016).
(Drowned Worlds Anthology, 2016)
(The Book of Swords Anthology, 2017)
(Robots vs. Fairies Anthology, 2018)
(Twelve Tomorrows Anthology, 2018)
(Lightspeed, March 2018) Isfdb:
(Wired, December 2018)
(Slate, January 2019)
(Uncanny Magazine, September 2020)
(Clarkesworld #192, September 2022) Isfdb:
Caroline M. Yoachim: Collaboration? (Uncanny Magazine #50, January 2023)
(Tor.com, September 2023)